Product Details

SNP ID

rs200560282

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.19:33088202 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CAGAGATGAAAAAGGAAGGTATAAA[C/T]GATTCCACGGGGCCTTTAGTGGAGG

Phenotype

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

GPATCH1 PubMed Links

Additional Information

For this assay, SNP(s) [rs7259333] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

GPATCH1

Gene Name

G-patch domain containing 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_018025.2	171	Nonsense Mutation	CGA,TGA	R48*	NP_060495.2
XM_006723255.3	171	Nonsense Mutation	CGA,TGA	R48*	XP_006723318.1

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