Product Details

SNP ID

rs11992923

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.8:142212197 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

AAGCTCTCGGGTCCATTGCAGGCCA[A/G]GTGACGGCATCAGCTGACAACGCAG

Phenotype

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

LINC00051 PubMed Links

Additional Information

For this assay, SNP(s) [rs78564166] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LINC00051

Gene Name

long intergenic non-protein coding RNA 51

There are no transcripts associated with this gene.

Gene

TSNARE1

Gene Name

t-SNARE domain containing 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001291931.1	2177	Intron			NP_001278860.1
NM_145003.4	2177	UTR 3			NP_659440.2
XM_011516912.1	2177	Intron			XP_011515214.1
XM_011516913.2	2177	Intron			XP_011515215.1
XM_011516914.1	2177	Intron			XP_011515216.1
XM_011516915.2	2177	Intron			XP_011515217.1
XM_011516916.1	2177	Intron			XP_011515218.1
XM_011516917.2	2177	Intron			XP_011515219.1
XM_011516918.1	2177	Intron			XP_011515220.1
XM_011516919.1	2177	Intron			XP_011515221.1
XM_011516920.1	2177	Intron			XP_011515222.1
XM_011516921.1	2177	Intron			XP_011515223.1
XM_011516922.1	2177	Intron			XP_011515224.1
XM_011516923.2	2177	Intron			XP_011515225.1
XM_011516924.1	2177	Intron			XP_011515226.1
XM_017013175.1	2177	Intron			XP_016868664.1
XM_017013176.1	2177	UTR 3			XP_016868665.1
XM_017013177.1	2177	UTR 3			XP_016868666.1
XM_017013178.1	2177	UTR 3			XP_016868667.1
XM_017013179.1	2177	Intron			XP_016868668.1
XM_017013180.1	2177	Intron			XP_016868669.1
XM_017013181.1	2177	Intron			XP_016868670.1

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