Product Details

SNP ID

rs6090041

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.20:64081323 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

GCCCACATAACACTCCTGAGCGGTG[A/G]GCACAGGTGAGGTCAGGGAAGCTCA

Phenotype

MIM: 602548 MIM: 605071 MIM: 604784

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

LKAAEAR1 PubMed Links

Additional Information

For this assay, SNP(s) [rs373552738] are located under a probe and SNP(s) [rs370985309] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LKAAEAR1

Gene Name

LKAAEAR motif containing 1

There are no transcripts associated with this gene.

Gene

MIR6813

Gene Name

microRNA 6813

There are no transcripts associated with this gene.

Gene

OPRL1

Gene Name

opioid related nociceptin receptor 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_000913.5		Intron			NP_000904.1
NM_001200019.1		Intron			NP_001186948.1
NM_001318853.1		Intron			NP_001305782.1
NM_001318854.1		Intron			NP_001305783.1
NM_001318855.1		Intron			NP_001305784.1
NM_182647.3		Intron			NP_872588.1
XM_011528828.2		Intron			XP_011527130.1
XM_011528830.2		Intron			XP_011527132.1
XM_017027852.1		Intron			XP_016883341.1
XM_017027853.1		Intron			XP_016883342.1
XM_017027854.1		Intron			XP_016883343.1
XM_017027855.1		Intron			XP_016883344.1

Gene

RGS19

Gene Name

regulator of G-protein signaling 19

There are no transcripts associated with this gene.

Gene

TCEA2

Gene Name

transcription elongation factor A2

There are no transcripts associated with this gene.

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