Product Details

SNP ID

rs12123784

Assay Type

Functionally Tested

NCBI dbSNP Submissions

1

Location

Chr.1:178850503 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TTTAAATTATGCATGCATTATTTTT[G/T]GGTTTTTTTTTATTTTTAAAAATGA

Phenotype

MIM: 603874

Polymorphism

G/T, Transversion Substitution

Allele Nomenclature

Literature Links

ANGPTL1 PubMed Links

Additional Information

For this assay, SNP(s) [rs144561044] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

ANGPTL1

Gene Name

angiopoietin like 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_004673.3	2578	UTR 3			NP_004664.1
XM_005245577.2	2578	UTR 3			XP_005245634.1

Gene

RALGPS2

Gene Name

Ral GEF with PH domain and SH3 binding motif 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001286247.1	2578	Intron			NP_001273176.1
NM_152663.4	2578	Intron			NP_689876.2
XM_006711410.3	2578	Intron			XP_006711473.1
XM_006711411.3	2578	Intron			XP_006711474.1
XM_011509688.1	2578	Intron			XP_011507990.1
XM_017001591.1	2578	Intron			XP_016857080.1

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