Product Details

SNP ID

rs61379849

Assay Type

Functionally Tested

NCBI dbSNP Submissions

1

Location

Chr.1:212797136 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GGTATAATGGGTTTGTCCTGCCATG[C/T]TTGGGTGTTCATCCAGTTCAAGGAC

Phenotype

MIM: 609174

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

NSL1 PubMed Links

Additional Information

For this assay, SNP(s) [rs75063374] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

NSL1

Gene Name

NSL1, MIS12 kinetochore complex component

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001042549.1	287	Intron			NP_001036014.1
NM_001297736.1	287	Intron			NP_001284665.1
NM_001297737.1	287	Intron			NP_001284666.1
NM_001297739.1	287	Intron			NP_001284668.1
NM_015471.3	287	Intron			NP_056286.3
XM_017000968.1	287	Intron			XP_016856457.1
XM_017000969.1	287	Intron			XP_016856458.1

Gene

TATDN3

Gene Name

TatD DNase domain containing 3

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001042552.2	287	Silent Mutation	TGC,TGT	C66C	NP_001036017.1
NM_001042553.2	287	Silent Mutation	TGC,TGT	C66C	NP_001036018.1
NM_001146169.1	287	Silent Mutation	TGC,TGT	C66C	NP_001139641.1
NM_001146170.1	287	Silent Mutation	TGC,TGT	C66C	NP_001139642.1
NM_001146171.1	287	Silent Mutation	TGC,TGT	C66C	NP_001139643.1
XM_011509202.2	287	Silent Mutation	TGC,TGT	C66C	XP_011507504.1
XM_017000328.1	287	Silent Mutation	TGC,TGT	C66C	XP_016855817.1
XM_017000329.1	287	Silent Mutation	TGC,TGT	C66C	XP_016855818.1
XM_017000330.1	287	Silent Mutation	TGC,TGT	C66C	XP_016855819.1
XM_017000331.1	287	Silent Mutation	TGC,TGT	C66C	XP_016855820.1

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