Product Details

SNP ID

rs559217

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.11:83260904 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

ACTAGATATCAATGTTTGCTGAATT[A/G]AAGTCATTAAGAAAAGCTTTGTTTT

Phenotype

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

ANKRD42 PubMed Links

Additional Information

For this assay, SNP(s) [rs80039616] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

ANKRD42

Gene Name

ankyrin repeat domain 42

There are no transcripts associated with this gene.

Gene

CCDC90B

Gene Name

coiled-coil domain containing 90B

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001286116.1	2527	UTR 3			NP_001273045.1
NM_001286117.1	2527	UTR 3			NP_001273046.1
NM_001286118.1	2527	UTR 3			NP_001273047.1
NM_001286119.1	2527	UTR 3			NP_001273048.1
NM_001286120.1	2527	UTR 3			NP_001273049.1
NM_021825.4	2527	UTR 3			NP_068597.2
XM_005274154.2	2527	Intron			XP_005274211.1
XM_005274156.3	2527	UTR 3			XP_005274213.1
XM_005274159.3	2527	UTR 3			XP_005274216.1
XM_017018103.1	2527	Intron			XP_016873592.1
XM_017018104.1	2527	UTR 3			XP_016873593.1

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