Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: pHCl-1
Entrez Gene ID: 39730
Gene Name: pH-sensitive chloride channel 1
Gene Aliases: BP1024, BcDNA:GH21757, CG12486, CG13444, CG33989, CG44099, CG6112, CT19189, Dmel\CG44099, Dmel_CG44099, pHCL-A, pHCl
Chromosome Location: Chr.3L: 15848578 - 15899029 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID): FBgn0264908

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001038935.3	NP_001034024.2	6 - 7	1595	82
	NM_001038936.4	NP_001034025.2	6 - 7	1592	82
	NM_001038937.2	NP_001034026.1	6 - 7	1595	82
	NM_001169979.1	NP_001163450.1	6 - 7	1595	82
	NM_001259852.1	NP_001246781.1	6 - 7	1600	82
	NM_001274965.1	NP_001261894.1	5 - 6	1579	82
	NM_001274968.1	NP_001261897.1	5 - 6	1574	82
	NM_001274969.1	NP_001261898.1	6 - 7	1595	82
	NM_001274971.1	NP_001261900.1	5 - 6	1574	82
	NM_001370024.1	NP_001356981.1	5 - 6	1579	82
	NM_001370025.1	NP_001356910.1	6 - 7	1600	82
GenBank mRNA	BT012472.1	-	6 - 7	1596	82