Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol: pHCl-1
Entrez Gene ID: 39730
Gene Name: pH-sensitive chloride channel 1
Gene Aliases: BP1024, BcDNA:GH21757, CG12486, CG13444, CG33989, CG44099, CG6112, CT19189, Dmel\CG44099, Dmel_CG44099, pHCL-A, pHCl
Chromosome Location: Chr.3L: 15848578 - 15899029 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID): FBgn0264908

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001038934.4	NP_001034023.2	9 - 10	1958	60
	NM_001038935.3	NP_001034024.2	10 - 11	2036	60
	NM_001038936.4	NP_001034025.2	10 - 11	2033	60
	NM_001038937.2	NP_001034026.1	10 - 11	2036	60
	NM_001169979.1	NP_001163450.1	10 - 11	2036	60
	NM_001259852.1	NP_001246781.1	10 - 11	2041	60
	NM_001259853.1	NP_001246782.1	9 - 10	1966	60
	NM_001274965.1	NP_001261894.1	9 - 10	2020	60
	NM_001274966.1	NP_001261895.1	8 - 9	1945	60
	NM_001274967.1	NP_001261896.1	8 - 9	1945	60
	NM_001274968.1	NP_001261897.1	9 - 10	2015	60
	NM_001274969.1	NP_001261898.1	10 - 11	2036	60
	NM_001274970.1	NP_001261899.1	8 - 9	1940	60
	NM_001274971.1	NP_001261900.1	9 - 10	2015	60
	NM_001370024.1	NP_001356981.1	9 - 10	2020	60
	NM_001370025.1	NP_001356910.1	10 - 11	2041	60
	NM_001370026.1	NP_001356909.1	8 - 9	1945	60
GenBank mRNA	BT012472.1	-	10 - 11	2037	60