Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
CAST
Entrez Gene ID
831
Gene Name
calpastatin
Gene Aliases
BS-17, PLACK
Chromosome Location
Chr.5: 96662037 - 96774683 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001042440.3 NP_001035905.1 27 - 28 2409 76
NM_001190442.1 NP_001177371.1 28 - 29 2281 76
NM_001284212.2 NP_001271141.1 25 - 26 2057 76
NM_001284213.2 NP_001271142.1 24 - 25 1967 76
NM_173060.3 NP_775083.1 26 - 27 2117 76
NR_104285.1 14 - 15 1270 76
XM_006714696.3 XP_006714759.1 30 - 31 2423 76
XM_006714697.3 XP_006714760.1 29 - 30 2437 76
XM_006714698.3 XP_006714761.1 28 - 29 2401 76
XM_006714699.3 XP_006714762.1 29 - 30 2364 76
XM_006714700.3 XP_006714763.1 28 - 29 2383 76
XM_006714701.3 XP_006714764.1 28 - 29 2399 76
XM_006714702.3 XP_006714765.1 28 - 29 2275 76
XM_006714703.3 XP_006714766.1 27 - 28 2360 76
XM_006714704.3 XP_006714767.1 28 - 29 2308 76
XM_006714705.3 XP_006714768.1 27 - 28 2314 76
XM_006714706.3 XP_006714769.1 27 - 28 2235 76
XM_006714707.3 XP_006714770.1 27 - 28 2186 76
XM_006714708.3 XP_006714771.1 26 - 27 2146 76
XM_006714709.3 XP_006714772.1 26 - 27 2109 76
XM_006714710.3 XP_006714773.1 25 - 26 2064 76
XM_006714711.3 XP_006714774.1 25 - 26 2109 76
XM_006714712.3 XP_006714775.1 24 - 25 2056 76
XM_006714713.3 XP_006714776.1 14 - 15 1273 76
XM_006714714.3 XP_006714777.1 14 - 15 1270 76
XM_006714715.3 XP_006714778.1 15 - 16 1999 76
XM_011543654.2 XP_011541956.1 28 - 29 2359 76
XM_011543655.2 XP_011541957.1 28 - 29 2356 76
XM_011543656.2 XP_011541958.1 27 - 28 2303 76
XM_011543657.2 XP_011541959.1 27 - 28 2185 76
XM_011543658.2 XP_011541960.1 25 - 26 2038 76
XM_017009911.1 XP_016865400.1 28 - 29 2398 76
XM_017009912.1 XP_016865401.1 29 - 30 2409 76
XM_017009913.1 XP_016865402.1 29 - 30 2381 76
XM_017009914.1 XP_016865403.1 28 - 29 2380 76
XM_017009915.1 XP_016865404.1 29 - 30 2385 76
XM_017009916.1 XP_016865405.1 28 - 29 2396 76
XM_017009917.1 XP_016865406.1 28 - 29 2317 76
XM_017009918.1 XP_016865407.1 27 - 28 2344 76
XM_017009919.1 XP_016865408.1 27 - 28 2317 76
XM_017009920.1 XP_016865409.1 27 - 28 2227 76
XM_017009921.1 XP_016865410.1 27 - 28 2241 76
XM_017009922.1 XP_016865411.1 26 - 27 2278 76
XM_017009923.1 XP_016865412.1 26 - 27 2275 76
XM_017009924.1 XP_016865413.1 26 - 27 2257 76
XM_017009925.1 XP_016865414.1 26 - 27 2196 76
XM_017009926.1 XP_016865415.1 26 - 27 2193 76
XM_017009927.1 XP_016865416.1 27 - 28 2182 76
XM_017009928.1 XP_016865417.1 26 - 27 2181 76
XM_017009929.1 XP_016865418.1 26 - 27 2100 76
XM_017009930.1 XP_016865419.1 25 - 26 2070 76
XM_017009931.1 XP_016865420.1 25 - 26 2061 76
XM_017009932.1 XP_016865421.1 24 - 25 2124 76
GenBank mRNA AB208816.1 - 28 - 29 2245 76
AF095891.1 - 2 - 3 114 76
AF327443.1 - 23 - 24 1959 76
AK292289.1 - 14 - 15 1273 76
AK292356.1 - 14 - 15 1246 76
AK296919.1 - 28 - 29 2239 76
AK297879.1 - 26 - 27 2059 76
AK298541.1 - 27 - 28 2186 76
AK299384.1 - 25 - 26 1817 76
AK300624.1 - 24 - 25 1950 76
AK302206.1 - 15 - 16 1273 76
AK314290.1 - 25 - 26 2062 76
AK315146.1 - 25 - 26 2061 76
AK315673.1 - 14 - 15 1218 76
AL045308.1 - 7 - 8 549 76
AL832174.1 - 26 - 27 2102 76
AL832349.1 - 26 - 27 2105 76
BC013579.1 - 27 - 28 2112 76
BC078149.1 - 22 - 23 1671 76
BT009783.1 - 24 - 25 1894 76
BX648397.1 - 25 - 26 2008 76
D16217.1 - 27 - 28 2179 76
D50827.1 - 5 - 6 427 76
S73329.1 - 6 - 7 451 76
U26724.2 - 18 - 19 1542 76
U31345.1 - 16 - 17 1286 76
U31346.1 - 6 - 7 502 76
U38525.1 - 9 - 10 745 76
U58996.2 - 14 - 15 1249 76

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