Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol: C21orf62-AS1
Entrez Gene ID: 54067
Gene Name: C21orf62 antisense RNA 1
Gene Aliases: C21orf49
Chromosome Location: Chr.21: 32772100 - 32797707 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NR_024622.1		3 - 4	434	84
RefSeq	NR_024623.1		3 - 4	422	84
GenBank mRNA	AK096601.1	-	3 - 4	422	84
	BC117397.1	-	3 - 4	316	84
	BC117399.1	-	3 - 4	328	84
	DA776905.1	-	3 - 4	422	84

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	CF272642.1	-	1 - 2			Chr. 21 - 32784895 - 32797318 [-] on Build GRCh38	84
GenBankmRNA	BX477211.1	-	3 - 4	372		Chr. 21 - 32772162 - 32797168 [+] on Build GRCh38	84
GenBankmRNA	AV717800.1	-	2 - 3	226		Chr. 21 - 32772174 - 32797446 [+] on Build GRCh38	84
GenBankmRNA	AV655412.1	-	3 - 4	300		Chr. 21 - 32772235 - 32797082 [+] on Build GRCh38	84

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	PAX3 and PAX7 binding protein 1	PAXBP1	BM020, C21orf66, FSAP105, GCFC, GCFC1	-16.8kb	Sense	Chr. - 32733899 - 32771858 on Build GRCh38
Downstream	uncharacterized LOC102724502	LOC102724502		161.6kb	Anti-sense	Chr. - 32958888 - 32960566 on Build GRCh38

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