Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol: LINC01548
Entrez Gene ID: 728409
Gene Name: long intergenic non-protein coding RNA 1548
Gene Aliases: C21orf54
Chromosome Location: Chr.21: 33165470 - 33170236 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NR_024102.1		3 - 4	374	99
GenBank mRNA	BC105115.1	-	3 - 4	374	99
	BC105117.1	-	3 - 4	374	99
	BX116511.1	-	3 - 4	327	99

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AA868122.1	-	1 - 2			Chr. 21 - 33165527 - 33169828 [+] on Build GRCh38	99
GenBankmRNA	AA400173.1	-	3 - 4	327		Chr. 21 - 33165535 - 33170189 [-] on Build GRCh38	99
GenBankmRNA	AA400147.1	-	1 - 2			Chr. 21 - 33165470 - 33169802 [+] on Build GRCh38	99
GenBankmRNA	AA934973.1	-	1 - 2			Chr. 21 - 33165528 - 33169823 [+] on Build GRCh38	99

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	uncharacterized LOC101928107	LOC101928107		-41.8kb	Sense	Chr. - 33111704 - 33123700 on Build GRCh38
Downstream	interferon alpha and beta receptor subunit 2	IFNAR2	IFN-R, IFN-alpha-REC, IFNABR, IFNARB, IMD45	61.3kb	Anti-sense	Chr. - 33229895 - 33264513 on Build GRCh38

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