Assay Design
The assay primers and probes lie within a single exon. This assay will detect gDNA.
Gene Transcripts
- Gene Symbol
- VTRNA1-1
- Entrez Gene ID
-
56664
- Gene Name
- vault RNA 1-1
- Gene Aliases
-
HVG1, VAULTRC1, VR1, hvg-1, vRNA
- Chromosome Location
-
Chr.5: 140711276 - 140711373 on Build GRCh38
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
Amplicon Length |
| RefSeq |
NR_026703.1 |
|
1 - 1 |
48 |
64 |
Non Gene Transcripts
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
IMAGE Clone ID |
Transcript Location |
Amplicon Length |
| GenBankmRNA |
DW439004.1 |
- |
|
65 |
|
Chr. - - [-] on Build |
64 |
| GenBankmRNA |
AF045143.3 |
- |
1 |
48 |
|
Chr. 5 - 140711276 - 140711373 [+] on Build GRCh38 |
64 |
| GenBankmRNA |
DA244709.1 |
- |
1 |
109 |
|
Chr. 5 - 140711215 - 140733281 [+] on Build GRCh38 |
64 |
| GenBankmRNA |
BU566463.1 |
- |
1 |
51 |
|
Chr. 5 - 140711275 - 140711576 [+] on Build GRCh38 |
64 |
Adjacent Gene Details
|
Gene Name |
Gene Symbol |
Alias |
Distance |
Relative Direction |
Location Chromosome |
| Upstream |
zinc finger matrin-type 2 |
ZMAT2 |
Ptg-12, Snu23 |
-4.6kb
|
Sense |
Chr. - 140700360 - 140706681 on Build GRCh38 |
| Downstream |
vault RNA 1-2 |
VTRNA1-2 |
HVG2, VAULTRC2, VR2, hvg-2 |
7.6kb
|
Sense |
Chr. - 140718926 - 140719013 on Build GRCh38 |
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