Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
KCNJ5
Entrez Gene ID
3762
Gene Name
potassium voltage-gated channel subfamily J member 5
Gene Aliases
CIR, GIRK4, KATP1, KIR3.4, LQT13
Chromosome Location
Chr.11: 128891418 - 128921163 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq XM_011542809.2 XP_011541111.1 3 - 3 5694 109
XM_011542810.2 XP_011541112.1 3 - 3 5616 109
GenBank mRNA BX647543.1 - 1 - 1 1747 109


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA CA427872.1 - 1 Chr. 11 - 128920526 - 128921165 [-] on Build GRCh38 109
GenBankmRNA AA904703.1 - 1 Chr. 11 - 128920805 - 128921165 [-] on Build GRCh38 109
GenBankmRNA AW510681.1 - 1 Chr. 11 - 128920674 - 128921161 [-] on Build GRCh38 109
GenBankmRNA AA506997.1 - 1 Chr. 11 - 128920731 - 128921165 [-] on Build GRCh38 109
GenBankmRNA AI334327.1 - 1 Chr. 11 - 128920648 - 128921165 [-] on Build GRCh38 109
GenBankmRNA AW104218.1 - 1 Chr. 11 - 128920877 - 128921163 [-] on Build GRCh38 109
GenBankmRNA AA729906.1 - 1 Chr. 11 - 128920792 - 128921162 [-] on Build GRCh38 109
GenBankmRNA AI097385.1 - 1 Chr. 11 - 128920826 - 128921165 [-] on Build GRCh38 109
GenBankmRNA AA576525.1 - 1 Chr. 11 - 128920739 - 128921161 [-] on Build GRCh38 109
GenBankmRNA AI621136.1 - 1 Chr. 11 - 128920826 - 128921163 [-] on Build GRCh38 109
GenBankmRNA DB333279.1 - 1 Chr. 11 - 128920615 - 128921162 [-] on Build GRCh38 109
GenBankmRNA BM995918.1 - 1 Chr. 11 - 128920544 - 128921162 [-] on Build GRCh38 109
GenBankmRNA AI312094.1 - 1 Chr. 11 - 128920663 - 128921165 [-] on Build GRCh38 109
GenBankmRNA AI337819.1 - 1 Chr. 11 - 128920733 - 128921165 [-] on Build GRCh38 109


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream chromosome 11 open reading frame 45 C11orf45 -9.6kb Anti-sense Chr. - 128899565 - 128909520 on Build GRCh38
Downstream tumor protein p53 regulated apoptosis inducing protein 1 TP53AIP1 P53AIP1 13.6kb Anti-sense Chr. - 128934732 - 128944233 on Build GRCh38

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