Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
Trub2
Entrez Gene ID
227682
Gene Name
TruB pseudouridine (psi) synthase homolog 2 (E. coli)
Gene Aliases
G430055L02Rik
Chromosome Location
Chr.2: 29761223 - 29787810 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001290495.1 NP_001277424.1 3 - 4 372 64
NR_110962.1 3 - 4 372 64
GenBank mRNA AK050587.1 - 3 - 4 362 64
AK081579.1 - 3 - 4 362 64
AU079587.1 - 3 - 4 372 64
BU707805.1 - 3 - 4 334 64


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BB664570.1 - 3 - 4 349 Chr. 2 - 29778774 - 29787646 [-] on Build GRCm38 64
GenBankmRNA BB611827.1 - 3 - 4 345 Chr. 2 - 29778731 - 29787644 [-] on Build GRCm38 64
GenBankmRNA BY257452.1 - 3 - 4 346 Chr. 2 - 29779865 - 29787644 [-] on Build GRCm38 64
GenBankmRNA BY728460.1 - 3 - 4 353 Chr. 2 - 29778732 - 29787652 [-] on Build GRCm38 64
GenBankmRNA BE623880.1 - 3 - 4 302 Chr. 2 - 29779839 - 29787601 [-] on Build GRCm38 64
GenBankmRNA BU515537.1 - 3 - 4 380 Chr. 2 - 29777566 - 29787648 [-] on Build GRCm38 64
GenBankmRNA BB654231.1 - 3 - 4 349 Chr. 2 - 29778757 - 29787648 [-] on Build GRCm38 64


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream predicted gene 13547 Gm13547 OTTMUSG00000012686 -17.6kb Anti-sense Chr. - 29761528 - 29764529 on Build GRCm38
Downstream coenzyme Q4 homolog (yeast) Coq4 A330041N06, D2Ertd97e 3.2kb Anti-sense Chr. - 29788226 - 29797743 on Build GRCm38

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