Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: EIR1
Entrez Gene ID: 835813
Gene Name: Auxin efflux carrier family protein
Gene Aliases: AGR, AGR1, AGRAVITROPIC ROOT, AGRAVITROPIC ROOT 1, ARABIDOPSIS THALIANA PIN-FORMED 2, AT5G57090, ATPIN2, AUXIN TRANSPORT PROTEIN EIR1, ETHYLENE INSENSITIVE ROOT 1, MM31, MUL3.3, MUL3_3, PIN-FORMED 2, PIN2, POLAR-AUXIN-TRANSPORT EFFLUX COMPONENT AGRAVITROPIC 1, WAV6, WAVY ROOTS 6
Chromosome Location: Chr.5: 23100516 - 23105228 on Build TAIR10.1

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001345238.1	NP_001331451.1	4 - 5	1563	69
RefSeq	NM_125091.4	NP_568848.1	4 - 5	1537	69
GenBank mRNA	AF056026.1	-	4 - 5	1306	69
	AF086906.1	-	4 - 5	1361	69
	AF093241.1	-	4 - 5	1311	69
	AK176358.1	-	4 - 5	1344	69
	AY078965.1	-	4 - 5	1340	69
	BT001152.1	-	4 - 5	1288	69