Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: CHUP1
Entrez Gene ID: 822157
Gene Name: Hydroxyproline-rich glycoprotein family protein
Gene Aliases: AT3G25690, Arabidopsis thaliana CHLOROPLAST UNUSUAL POSITIONING 1, AtCHUP1, CHLOROPLAST UNUSUAL POSITIONING 1
Chromosome Location: Chr.3: 9352444 - 9357953 on Build TAIR10.1

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001203045.1	NP_001189974.1	5 - 6	2524	130
	NM_001203046.1	NP_001189975.1	5 - 6	2101	130
	NM_001338761.1	NP_001327702.1	6 - 7	2709	130
	NM_001338762.1	NP_001327703.1	6 - 7	2548	130
	NM_001338763.1	NP_001327701.1	5 - 6	3524	130
	NM_113468.5	NP_189197.2	4 - 5	3107	130
GenBank mRNA	AB087408.1	-	4 - 5	2539	130