Product Details

SNP ID

rs137892089

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.10:113692031 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GGCACTTGGAAAAGAACACCAGCTG[C/T]GGTGGTAGCAGTGGGATTTGTGCTT

Phenotype

MIM: 601761

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

CASP7 PubMed Links

Additional Information

For this assay, SNP(s) [rs12358524] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CASP7

Gene Name

caspase 7

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001227.4	51	Intron			NP_001218.1
NM_001267056.1	51	Intron			NP_001253985.1
NM_001267057.1	51	Intron			NP_001253986.1
NM_001267058.1	51	Intron			NP_001253987.1
NM_001320911.1	51	Intron			NP_001307840.1
NM_033338.5	51	Silent Mutation	TGC,TGT	C20C	NP_203124.1
NM_033339.4	51	UTR 5			NP_203125.1
NM_033340.3	51	Intron			NP_203126.1
XM_006718017.3	51	UTR 5			XP_006718080.1
XM_011540260.1	51	Intron			XP_011538562.1
XM_017016763.1	51	Intron			XP_016872252.1
XM_017016764.1	51	Intron			XP_016872253.1

View Full Product Details