Product Details

SNP ID
rs142169267
Assay Type
Functionally Tested
NCBI dbSNP Submissions
NA
Location
Chr.17:81239651 on Build GRCh38
Set Membership
Context Sequence [VIC/FAM]
AGGACTTCTGCGCGCGGGAGTTCGA[A/G]GCCCTGCGGAGCTGCTTCGCCGCTG
Phenotype
MIM: 616525
Polymorphism
A/G, Transition Substitution
Allele Nomenclature
Literature Links
C17orf89 PubMed Links
Additional Information
For this assay, SNP(s) [rs2255166] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene
C17orf89
Gene Name
chromosome 17 open reading frame 89
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_001086521.1 221 Silent Mutation GAA,GAG E56E NP_001079990.1
Gene
LOC105371925
Gene Name
uncharacterized LOC105371925
There are no transcripts associated with this gene.

Gene
SLC38A10
Gene Name
solute carrier family 38 member 10
There are no transcripts associated with this gene.

Gene
TEPSIN
Gene Name
TEPSIN, adaptor related protein complex 4 accessory protein
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_144679.2 221 Intron NP_653280.1
XM_005257066.2 221 Intron XP_005257123.1
XM_005257067.2 221 Intron XP_005257124.1
XM_006721709.3 221 Intron XP_006721772.1
XM_006721712.2 221 Intron XP_006721775.1
XM_011524355.1 221 Intron XP_011522657.1
XM_011524356.1 221 Intron XP_011522658.1
XM_011524357.1 221 Intron XP_011522659.1
XM_011524358.2 221 Intron XP_011522660.1
XM_017024202.1 221 Intron XP_016879691.1
XM_017024203.1 221 Intron XP_016879692.1
XM_017024204.1 221 Intron XP_016879693.1

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