Product Details

SNP ID

rs11202105

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.10:86654498 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GCTGGCGGCATGGAGCGACTGAGCA[C/T]GTGCAGCTCCCACATCGCTATATAA

Phenotype

MIM: 606665

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

OPN4 PubMed Links

Additional Information

For this assay, SNP(s) [rs35455944] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

OPN4

Gene Name

opsin 4

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001030015.2	1004	Intron			NP_001025186.1
NM_033282.3	1004	Intron			NP_150598.1
XM_017016955.1	1004	UTR 5			XP_016872444.1
XM_017016956.1	1004	UTR 5			XP_016872445.1
XM_017016957.1	1004	UTR 5			XP_016872446.1

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