Product Details
- SNP ID
-
rs201054179
- Assay Type
- Functionally Tested
- NCBI dbSNP Submissions
-
3
- Location
-
Chr.1:151090438 on Build GRCh38
- Set Membership
-
- Context Sequence [VIC/FAM]
- CATCACCCCTCCACCTTGCAGCTCA[A/G]TATGGTCATTATTCCACAGCAGAAG
- Phenotype
-
- Polymorphism
- A/G, Transition Substitution
- Allele Nomenclature
-
- Literature Links
-
GABPB2
PubMed Links
- Additional Information
-
For this assay, SNP(s) [rs11204774] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Gene Details
- Gene
- GABPB2
- Gene Name
- GA binding protein transcription factor beta subunit 2
Transcript Accession |
SNP Location |
SNP Type |
Codon Change |
Amino Acid Change |
Protein ID |
NM_001323906.1 |
472 |
Silent Mutation |
CAA,CAG |
Q47Q |
NP_001310835.1 |
NM_001323907.1 |
472 |
Intron |
|
|
NP_001310836.1 |
NM_001323908.1 |
472 |
Silent Mutation |
CAA,CAG |
Q47Q |
NP_001310837.1 |
NM_001323909.1 |
472 |
Silent Mutation |
CAA,CAG |
Q47Q |
NP_001310838.1 |
NM_001323910.1 |
472 |
Silent Mutation |
CAA,CAG |
Q63Q |
NP_001310839.1 |
NM_001323911.1 |
472 |
Silent Mutation |
CAA,CAG |
Q47Q |
NP_001310840.1 |
NM_001323912.1 |
472 |
Intron |
|
|
NP_001310841.1 |
NM_001323913.1 |
472 |
Intron |
|
|
NP_001310842.1 |
NM_144618.2 |
472 |
Silent Mutation |
CAA,CAG |
Q47Q |
NP_653219.1 |
XM_017000246.1 |
472 |
Silent Mutation |
CAA,CAG |
Q63Q |
XP_016855735.1 |
XM_017000247.1 |
472 |
Silent Mutation |
CAA,CAG |
Q63Q |
XP_016855736.1 |
XM_017000248.1 |
472 |
Silent Mutation |
CAA,CAG |
Q59Q |
XP_016855737.1 |
XM_017000249.1 |
472 |
Silent Mutation |
CAA,CAG |
Q47Q |
XP_016855738.1 |
XM_017000250.1 |
472 |
Silent Mutation |
CAA,CAG |
Q63Q |
XP_016855739.1 |
XM_017000251.1 |
472 |
Silent Mutation |
CAA,CAG |
Q59Q |
XP_016855740.1 |
XM_017000252.1 |
472 |
Intron |
|
|
XP_016855741.1 |
XM_017000253.1 |
472 |
Silent Mutation |
CAA,CAG |
Q63Q |
XP_016855742.1 |
XM_017000254.1 |
472 |
Intron |
|
|
XP_016855743.1 |
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