Product Details

SNP ID

rs202224828

Assay Type

Functionally Tested

NCBI dbSNP Submissions

11

Location

Chr.1:54807682 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GTACCAGGCCATCATGAAAGAGAAG[C/T]GGCTGAAGGTGAGGCCTCTGGGGCC

Phenotype

MIM: 616446

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

LEXM PubMed Links

Additional Information

For this assay, SNP(s) [rs671022] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LEXM

Gene Name

lymphocyte expansion molecule

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001110533.1	403	Missense Mutation	CGG,TGG	R117W	NP_001104003.1
NM_152607.2	403	Missense Mutation	CGG,TGG	R117W	NP_689820.2
XM_017000480.1	403	Missense Mutation	CGG,TGG	R117W	XP_016855969.1
XM_017000481.1	403	Missense Mutation	CGG,TGG	R117W	XP_016855970.1

Gene

TTC22

Gene Name

tetratricopeptide repeat domain 22

There are no transcripts associated with this gene.

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