Product Details

SNP ID

rs200409116

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.9:99915271 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GAAGATGAAGAAAAAGTGAAATTAC[A/G]CCGTCTTGAACCAGCTATCCAGAAA

Phenotype

MIM: 604204

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

STX17 PubMed Links

Additional Information

For this assay, SNP(s) [rs41305451] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

STX17

Gene Name

syntaxin 17

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_017919.2	499	Missense Mutation	CAC,CGC	H11R	NP_060389.2
XM_011518820.2	499	Missense Mutation	CAC,CGC	H11R	XP_011517122.1
XM_011518821.2	499	Missense Mutation	CAC,CGC	H11R	XP_011517123.1
XM_011518823.2	499	Intron			XP_011517125.1
XM_017014875.1	499	UTR 5			XP_016870364.1

Gene

STX17-AS1

Gene Name

STX17 antisense RNA 1

There are no transcripts associated with this gene.

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