Product Details

SNP ID

rs1134281

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.2:227685434 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TCACTGTCATGAGACCAGCACTGAG[A/G]GGACGGTGCCAAACCATTCATGAAG

Phenotype

MIM: 606152

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

SLC19A3 PubMed Links

Additional Information

For this assay, SNP(s) [rs111409314,rs76014609] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

SLC19A3

Gene Name

solute carrier family 19 member 3

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_025243.3	3620	UTR 3			NP_079519.1
XM_005246874.3	3620	UTR 3			XP_005246931.1
XM_011511931.2	3620	UTR 3			XP_011510233.1
XM_011511932.1	3620	UTR 3			XP_011510234.1
XM_011511933.1	3620	UTR 3			XP_011510235.1
XM_017005030.1	3620	UTR 3			XP_016860519.1
XM_017005031.1	3620	UTR 3			XP_016860520.1
XM_017005032.1	3620	UTR 3			XP_016860521.1
XM_017005033.1	3620	UTR 3			XP_016860522.1
XM_017005034.1	3620	UTR 3			XP_016860523.1

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