Product Details

SNP ID

rs2167709

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.10:65918778 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TCCTGCATAATTAATAATGACCTAT[G/T]AAATAGATCCTTCTTTTCCCATACC

Phenotype

MIM: 607667

Polymorphism

G/T, Transversion Substitution

Allele Nomenclature

Literature Links

CTNNA3 PubMed Links

Additional Information

For this assay, SNP(s) [rs114520469] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CTNNA3

Gene Name

catenin alpha 3

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001127384.2	4437	UTR 3			NP_001120856.1
NM_001291133.1	4437	Intron			NP_001278062.1
NM_013266.3	4437	UTR 3			NP_037398.2
XM_017016151.1	4437	UTR 3			XP_016871640.1
XM_017016152.1	4437	UTR 3			XP_016871641.1
XM_017016153.1	4437	UTR 3			XP_016871642.1
XM_017016154.1	4437	UTR 3			XP_016871643.1
XM_017016155.1	4437	UTR 3			XP_016871644.1
XM_017016156.1	4437	UTR 3			XP_016871645.1
XM_017016157.1	4437	UTR 3			XP_016871646.1
XM_017016158.1	4437	Intron			XP_016871647.1

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