Product Details

SNP ID

rs11938379

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.4:118851562 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GTGCTTTTGCTTATATAAGATATAG[C/T]TATCGATATTATGGAATAAAACAAT

Phenotype

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

SYNPO2 PubMed Links

Additional Information

For this assay, SNP(s) [rs114735834] are located under a probe and SNP(s) [rs114168088] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

SYNPO2

Gene Name

synaptopodin 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001128933.2		Intron			NP_001122405.1
NM_001128934.2		Intron			NP_001122406.1
NM_001286754.1		Intron			NP_001273683.1
NM_001286755.1		Intron			NP_001273684.1
NM_133477.2		Intron			NP_597734.2

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