Product Details

SNP ID

rs1044754

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.14:50108693 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

AATGTACCATCTAGCACCAATGCCT[A/G]TAAATACCAGAATTCCATCCGGTTA

Phenotype

MIM: 601247 MIM: 615260

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

LINC01599 PubMed Links

Additional Information

For this assay, SNP(s) [rs76988825] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LINC01599

Gene Name

long intergenic non-protein coding RNA 1599

There are no transcripts associated with this gene.

Gene

SOS2

Gene Name

SOS Ras/Rho guanine nucleotide exchange factor 2

There are no transcripts associated with this gene.

Gene

VCPKMT

Gene Name

valosin containing protein lysine methyltransferase

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001040662.1		Intron			NP_001035752.1
NM_024558.2		Intron			NP_078834.2
XM_005268060.3		Intron			XP_005268117.1
XM_017021640.1		Intron			XP_016877129.1
XM_017021641.1		Intron			XP_016877130.1
XM_017021642.1		Intron			XP_016877131.1

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