Product Details

SNP ID

rs3744776

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.17:48577068 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

AGAAAGAGAAAGTTTTATTGCCCCC[A/G]AAAGAGAGAGTCCTTTCTTCCAGGG

Phenotype

MIM: 142966 MIM: 142965 MIM: 610173

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

HOXB3 PubMed Links

Additional Information

For this assay, SNP(s) [rs79154089] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

HOXB3

Gene Name

homeobox B3

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_002146.4		Intron			NP_002137.4
XM_005257277.3		Intron			XP_005257334.1
XM_005257280.3		Intron			XP_005257337.1
XM_005257282.3		Intron			XP_005257339.1
XM_006721854.2		Intron			XP_006721917.1
XM_011524707.2		Intron			XP_011523009.1
XM_011524708.2		Intron			XP_011523010.1
XM_011524710.1		Intron			XP_011523012.1
XM_011524719.1		Intron			XP_011523021.1
XM_011524720.2		Intron			XP_011523022.1
XM_011524721.2		Intron			XP_011523023.1
XM_011524726.2		Intron			XP_011523028.1
XM_017024557.1		Intron			XP_016880046.1
XM_017024558.1		Intron			XP_016880047.1
XM_017024559.1		Intron			XP_016880048.1
XM_017024560.1		Intron			XP_016880049.1
XM_017024561.1		Intron			XP_016880050.1
XM_017024562.1		Intron			XP_016880051.1
XM_017024563.1		Intron			XP_016880052.1

Gene

HOXB4

Gene Name

homeobox B4

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_024015.4		Intron			NP_076920.1

Gene

MIR10A

Gene Name

microRNA 10a

There are no transcripts associated with this gene.

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