Product Details

SNP ID

rs9993042

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.4:86609190 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TGTCTTCACATCTATTTTTTTCTTA[A/C]GAGTCATGTACTGTTATCCCTATGA

Phenotype

MIM: 600267

Polymorphism

A/C, Transversion Substitution

Allele Nomenclature

Literature Links

PTPN13 PubMed Links

Additional Information

For this assay, SNP(s) [rs78515473] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PTPN13

Gene Name

protein tyrosine phosphatase, non-receptor type 13

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_006264.2		Intron			NP_006255.1
NM_080683.2		Intron			NP_542414.1
NM_080684.2		Intron			NP_542415.1
NM_080685.2		Intron			NP_542416.1
XM_011532165.1		Intron			XP_011530467.1
XM_017008511.1		Intron			XP_016864000.1
XM_017008512.1		Intron			XP_016864001.1
XM_017008513.1		Intron			XP_016864002.1
XM_017008514.1		Intron			XP_016864003.1
XM_017008515.1		Intron			XP_016864004.1
XM_017008516.1		Intron			XP_016864005.1

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