Product Details

SNP ID

rs6750377

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.2:63145298 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TAGTAATATAGAGAGGGACCAGTGG[C/T]GGGTGGGGCCCTGGCACTCCGAAGA

Phenotype

MIM: 613580

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

WDPCP PubMed Links

Additional Information

For this assay, SNP(s) [rs115347511,rs149690991] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

WDPCP

Gene Name

WD repeat containing planar cell polarity effector

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001042692.2		Intron			NP_001036157.1
NM_015910.5		Intron			NP_056994.3
XM_005264348.3		Intron			XP_005264405.1
XM_011532881.2		Intron			XP_011531183.1
XM_011532884.2		Intron			XP_011531186.1
XM_011532886.2		Intron			XP_011531188.1
XM_011532887.2		Intron			XP_011531189.1
XM_011532890.2		Intron			XP_011531192.1
XM_011532891.2		Intron			XP_011531193.1
XM_017004251.1		Intron			XP_016859740.1
XM_017004252.1		Intron			XP_016859741.1
XM_017004253.1		Intron			XP_016859742.1
XM_017004254.1		Intron			XP_016859743.1

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