Product Details

SNP ID

rs12442844

Assay Type

Functionally tested

NCBI dbSNP Submissions

NA

Location

Chr.15:99716335 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TGAACCTTTTAAGAAAAATAAGTTA[A/C]TCTCAATTTTTCCCTGAATGTGTTG

Phenotype

MIM: 600660

Polymorphism

A/C, Transversion substitution

Allele Nomenclature

Literature Links

LYSMD4 PubMed Links

Gene Details

Gene

LYSMD4

Gene Name

LysM domain containing 4

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001284417.1	5843	Intron			NP_001271346.1
NM_001284418.1	5843	Intron			NP_001271347.1
NM_001284419.1	5843	Intron			NP_001271348.1
NM_001284420.1	5843	Intron			NP_001271349.1
NM_001284421.1	5843	Intron			NP_001271350.1
NM_001284422.1	5843	Intron			NP_001271351.1
NM_152449.3	5843	Intron			NP_689662.2
XM_006720397.3	5843	Intron			XP_006720460.2
XM_011521241.1	5843	Intron			XP_011519543.1
XM_011521242.2	5843	UTR 3			XP_011519544.1
XM_011521243.2	5843	Intron			XP_011519545.1
XM_011521244.1	5843	Intron			XP_011519546.1
XM_011521245.2	5843	UTR 3			XP_011519547.1
XM_017021926.1	5843	Intron			XP_016877415.1
XM_017021927.1	5843	Intron			XP_016877416.1
XM_017021928.1	5843	Intron			XP_016877417.1
XM_017021929.1	5843	Intron			XP_016877418.1
XM_017021930.1	5843	Intron			XP_016877419.1

Gene

MEF2A

Gene Name

myocyte enhancer factor 2A

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001130926.2	5843	UTR 3			NP_001124398.1
NM_001130927.2	5843	UTR 3			NP_001124399.1
NM_001130928.2	5843	UTR 3			NP_001124400.1
NM_001171894.2	5843	UTR 3			NP_001165365.1
NM_001319206.1	5843	UTR 3			NP_001306135.1
NM_005587.3	5843	UTR 3			NP_005578.2
XM_005254914.2	5843	UTR 3			XP_005254971.1
XM_005254915.2	5843	UTR 3			XP_005254972.1
XM_005254916.3	5843	Intron			XP_005254973.1
XM_011521571.2	5843	UTR 3			XP_011519873.1
XM_011521572.2	5843	UTR 3			XP_011519874.1
XM_011521573.2	5843	UTR 3			XP_011519875.1
XM_011521576.2	5843	UTR 3			XP_011519878.1
XM_011521577.2	5843	UTR 3			XP_011519879.1
XM_011521578.2	5843	UTR 3			XP_011519880.1
XM_011521579.2	5843	UTR 3			XP_011519881.1
XM_011521581.2	5843	UTR 3			XP_011519883.1
XM_011521582.2	5843	UTR 3			XP_011519884.1
XM_011521583.2	5843	UTR 3			XP_011519885.1
XM_011521585.2	5843	UTR 3			XP_011519887.1
XM_011521586.2	5843	UTR 3			XP_011519888.1
XM_011521587.2	5843	UTR 3			XP_011519889.1
XM_011521590.2	5843	Intron			XP_011519892.1
XM_017022190.1	5843	UTR 3			XP_016877679.1
XM_017022191.1	5843	UTR 3			XP_016877680.1
XM_017022192.1	5843	UTR 3			XP_016877681.1
XM_017022193.1	5843	UTR 3			XP_016877682.1
XM_017022194.1	5843	UTR 3			XP_016877683.1
XM_017022195.1	5843	UTR 3			XP_016877684.1
XM_017022196.1	5843	UTR 3			XP_016877685.1
XM_017022197.1	5843	UTR 3			XP_016877686.1
XM_017022198.1	5843	UTR 3			XP_016877687.1
XM_017022199.1	5843	UTR 3			XP_016877688.1
XM_017022200.1	5843	UTR 3			XP_016877689.1
XM_017022201.1	5843	UTR 3			XP_016877690.1
XM_017022202.1	5843	UTR 3			XP_016877691.1
XM_017022203.1	5843	Intron			XP_016877692.1
XM_017022204.1	5843	Intron			XP_016877693.1

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