Product Details

SNP ID

rs13045492

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.20:50517998 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

CATCACTTGCAAAGATAAGATGAGC[A/T]TAGCAAAACTAGGCTTTCAAAATAA

Phenotype

MIM: 176885

Polymorphism

A/T, Transversion Substitution

Allele Nomenclature

Literature Links

PTPN1 PubMed Links

Additional Information

For this assay, SNP(s) [rs117635332] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PTPN1

Gene Name

protein tyrosine phosphatase, non-receptor type 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001278618.1		Intron			NP_001265547.1
NM_002827.3		Intron			NP_002818.1

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