Product Details

SNP ID
rs41305924
Assay Type
Functionally Tested
NCBI dbSNP Submissions
NA
Location
Chr.7:27129380 on Build GRCh38
Set Membership
Context Sequence [VIC/FAM]
TTGGGCAGTTTGTGGTCTTTCTTCC[A/G]CTTCATCCTCCGGTTCTGAAACCAG
Phenotype
MIM: 616068 MIM: 142954 MIM: 142953
Polymorphism
A/G, Transition Substitution
Allele Nomenclature
Literature Links
HOXA-AS2 PubMed Links
Additional Information
For this assay, SNP(s) [rs2158218] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene
HOXA-AS2
Gene Name
HOXA cluster antisense RNA 2
There are no transcripts associated with this gene.

Gene
HOXA3
Gene Name
homeobox A3
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_030661.4 855 Intron NP_109377.1
NM_153631.2 855 Intron NP_705895.1
XM_005249730.2 855 Intron XP_005249787.1
XM_005249731.2 855 Intron XP_005249788.1
XM_005249732.3 855 Intron XP_005249789.1
XM_006715715.2 855 Intron XP_006715778.1
XM_011515343.2 855 Intron XP_011513645.1
Gene
HOXA4
Gene Name
homeobox A4
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_002141.4 855 Missense Mutation CGG,TGG R270W NP_002132.3

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