Product Details

SNP ID

rs638769

Assay Type

Functionally Tested

NCBI dbSNP Submissions

46

Location

Chr.1:42181359 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CCCAGCGGGAAAAGTGTATGAACCA[C/G]TTAACACCTAAAATTTACCTTCTCT

Phenotype

MIM: 616035

Polymorphism

C/G, Transversion Substitution

Allele Nomenclature

Literature Links

FOXJ3 PubMed Links

Additional Information

For this assay, SNP(s) [rs79076288] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

FOXJ3

Gene Name

forkhead box J3

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001198850.1		Intron			NP_001185779.1
NM_001198851.1		Intron			NP_001185780.1
NM_001198852.1		Intron			NP_001185781.1
NM_014947.4		Intron			NP_055762.3
XM_005270632.4		Intron			XP_005270689.1
XM_006710458.3		Intron			XP_006710521.1
XM_006710459.3		Intron			XP_006710522.1
XM_011541026.2		Intron			XP_011539328.1
XM_017000693.1		Intron			XP_016856182.1
XM_017000694.1		Intron			XP_016856183.1
XM_017000695.1		Intron			XP_016856184.1

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