Product Details

SNP ID

rs6442466

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.3:14678628 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

CCTCATATCCTTTATAAATTTCTTA[C/T]ACATTTCATTCCTTTGTGGGAATTG

Phenotype

MIM: 616735

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

C3orf20 PubMed Links

Additional Information

For this assay, SNP(s) [rs74339032] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

C3orf20

Gene Name

chromosome 3 open reading frame 20

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001184957.1		Intron			NP_001171886.1
NM_001184958.1		Intron			NP_001171887.1
NM_032137.4		Intron			NP_115513.4
XM_006713341.2		Intron			XP_006713404.1
XM_006713342.2		Intron			XP_006713405.1
XM_006713343.2		Intron			XP_006713406.1
XM_011534153.2		Intron			XP_011532455.1
XM_011534154.2		Intron			XP_011532456.1
XM_011534157.2		Intron			XP_011532459.1
XM_011534158.2		Intron			XP_011532460.1
XM_017007310.1		Intron			XP_016862799.1

Gene

CCDC174

Gene Name

coiled-coil domain containing 174

There are no transcripts associated with this gene.

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