Product Details

SNP ID

rs11980923

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.7:90407559 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TCAGCAAATAATCGAGTGCCTTTTA[C/T]GTGCCAGTATAGGGAACAGTGAACA

Phenotype

MIM: 611232

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

CLDN12 PubMed Links

Additional Information

For this assay, SNP(s) [rs139136039] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CLDN12

Gene Name

claudin 12

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001185072.2		Intron			NP_001172001.1
NM_001185073.2		Intron			NP_001172002.1
NM_012129.4		Intron			NP_036261.1

Gene

LOC101409256

Gene Name

cell division cycle 42 pseudogene

There are no transcripts associated with this gene.

Gene

LOC102723899

Gene Name

pituitary tumor-transforming gene 1 protein-interacting protein

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
XM_011516764.2		Intron			XP_011515066.1
XM_017012889.1		Intron			XP_016868378.1
XM_017012890.1		Intron			XP_016868379.1
XM_017012891.1		Intron			XP_016868380.1
XM_017012892.1		Intron			XP_016868381.1
XM_017012893.1		Intron			XP_016868382.1
XM_017012894.1		Intron			XP_016868383.1

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