Product Details

SNP ID

rs12562208

Assay Type

Functionally Tested

NCBI dbSNP Submissions

12

Location

Chr.1:33145203 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

GTTTTTGGACAGGTTTGTGGTGTGG[C/T]ACTTGCCAGCATGGGATATGGGACC

Phenotype

MIM: 608353 MIM: 616755

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

AZIN2 PubMed Links

Additional Information

For this assay, SNP(s) [rs80169825] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

AZIN2

Gene Name

antizyme inhibitor 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001293562.1	3890	Intron			NP_001280491.1
NM_001301823.1	3890	Intron			NP_001288752.1
NM_001301824.1	3890	Intron			NP_001288753.1
NM_001301825.1	3890	Intron			NP_001288754.1
NM_001301826.1	3890	Intron			NP_001288755.1
NM_052998.3	3890	Intron			NP_443724.1
XM_005270404.2	3890	Intron			XP_005270461.1
XM_005270406.1	3890	Intron			XP_005270463.1
XM_005270407.1	3890	Intron			XP_005270464.1
XM_006710312.1	3890	Intron			XP_006710375.1
XM_011540557.1	3890	Intron			XP_011538859.1
XM_011540563.1	3890	Intron			XP_011538865.1
XM_011540566.1	3890	Intron			XP_011538868.1
XM_017000167.1	3890	Intron			XP_016855656.1
XM_017000168.1	3890	Intron			XP_016855657.1
XM_017000169.1	3890	Intron			XP_016855658.1
XM_017000170.1	3890	Intron			XP_016855659.1
XM_017000171.1	3890	Intron			XP_016855660.1
XM_017000172.1	3890	Intron			XP_016855661.1
XM_017000173.1	3890	Intron			XP_016855662.1
XM_017000174.1	3890	Intron			XP_016855663.1
XM_017000175.1	3890	Intron			XP_016855664.1
XM_017000176.1	3890	Intron			XP_016855665.1
XM_017000177.1	3890	Intron			XP_016855666.1
XM_017000178.1	3890	Intron			XP_016855667.1

Gene

TRIM62

Gene Name

tripartite motif containing 62

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_018207.2	3890	Intron			NP_060677.2
XM_011541705.2	3890	Intron			XP_011540007.1
XM_017001629.1	3890	UTR 3			XP_016857118.1
XM_017001630.1	3890	Intron			XP_016857119.1
XM_017001631.1	3890	Intron			XP_016857120.1

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