Product Details

SNP ID

rs1096564

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.5:57182012 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

ATACAAGATATGTCATTTAGTTTCT[C/T]GGTCTTTAGTTATTATTTTGTTCAC

Phenotype

MIM: 608412

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

GPBP1 PubMed Links

Additional Information

For this assay, SNP(s) [rs139470222] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

GPBP1

Gene Name

GC-rich promoter binding protein 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001127235.2		Intron			NP_001120707.2
NM_001127236.2		Intron			NP_001120708.1
NM_001203246.1		Intron			NP_001190175.1
NM_022913.3		Intron			NP_075064.1
XM_006714673.3		Intron			XP_006714736.1
XM_006714674.3		Intron			XP_006714737.1
XM_017009754.1		Intron			XP_016865243.1
XM_017009755.1		Intron			XP_016865244.1
XM_017009756.1		Intron			XP_016865245.1
XM_017009757.1		Intron			XP_016865246.1
XM_017009758.1		Intron			XP_016865247.1
XM_017009759.1		Intron			XP_016865248.1

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