Product Details

SNP ID

rs40327

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.16:64944398 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

ATTTCAGGCCCTCATTCTATCTCAT[A/T]TTGACCTTTGCAAAAGCCCTCCTGG

Phenotype

MIM: 600023

Polymorphism

A/T, Transversion Substitution

Allele Nomenclature

Literature Links

CDH11 PubMed Links

Additional Information

For this assay, SNP(s) [rs77029150] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CDH11

Gene Name

cadherin 11

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001308392.1	6151	UTR 3			NP_001295321.1
NM_001797.3	6151	UTR 3			NP_001788.2
XM_005255761.3	6151	Intron			XP_005255818.1
XM_005255762.2	6151	Intron			XP_005255819.1
XM_005255763.2	6151	Intron			XP_005255820.1
XM_011522803.2	6151	Intron			XP_011521105.1
XM_017022830.1	6151	Intron			XP_016878319.1

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