Product Details

SNP ID

rs1517602

Assay Type

Functionally Tested

NCBI dbSNP Submissions

26

Location

Chr.1:84555874 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

AGGGGAATCAATGCTCTGGTCCTCT[A/G]AAACCAGCTTATGTGCTTTTTTGTA

Phenotype

MIM: 600873

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

CTBS PubMed Links

Additional Information

For this assay, SNP(s) [rs72950335] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CTBS

Gene Name

chitobiase

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_004388.2		Intron			NP_004379.1

Gene

SPATA1

Gene Name

spermatogenesis associated 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001310156.1		Intron			NP_001297085.1
XM_011542514.2		Intron			XP_011540816.1
XM_011542515.2		Intron			XP_011540817.1
XM_011542516.1		Intron			XP_011540818.1
XM_011542517.1		Intron			XP_011540819.1
XM_011542519.2		Intron			XP_011540821.1
XM_011542520.2		Intron			XP_011540822.1
XM_011542521.2		Intron			XP_011540823.1
XM_011542522.2		Intron			XP_011540824.1

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