Product Details

SNP ID

rs508224

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.18:46479177 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CCAAGTGGAAATATGACTATTAAAT[A/G]TACGCTCCCAGATCCCTTACACTTG

Phenotype

MIM: 613072

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

LOXHD1 PubMed Links

Additional Information

For this assay, SNP(s) [rs111267271] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LOXHD1

Gene Name

lipoxygenase homology domains 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001145472.2		Intron			NP_001138944.1
NM_001145473.2		Intron			NP_001138945.1
NM_001173129.1		Intron			NP_001166600.1
NM_001308013.1		Intron			NP_001294942.1
NM_144612.6		Intron			NP_653213.6
XM_006722388.3		Intron			XP_006722451.1
XM_006722389.3		Intron			XP_006722452.1
XM_006722390.3		Intron			XP_006722453.1
XM_006722391.3		Intron			XP_006722454.1
XM_011525804.2		Intron			XP_011524106.1
XM_011525807.2		Intron			XP_011524109.1
XM_011525810.2		Intron			XP_011524112.1
XM_011525811.2		Intron			XP_011524113.1
XM_017025540.1		Intron			XP_016881029.1
XM_017025541.1		Intron			XP_016881030.1
XM_017025542.1		Intron			XP_016881031.1
XM_017025543.1		Intron			XP_016881032.1
XM_017025544.1		Intron			XP_016881033.1
XM_017025545.1		Intron			XP_016881034.1
XM_017025546.1		Intron			XP_016881035.1
XM_017025547.1		Intron			XP_016881036.1
XM_017025548.1		Intron			XP_016881037.1

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