Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
sgg
Entrez Gene ID
31248
Gene Name
shaggy
Gene Aliases
CG2621, DMSGG3, DMZ3K25Z, Dm Zw3, Dmel\CG2621, Dmel_CG2621, Dmsgg3, EG:155E2.3, EG:BACR7C10.8, GSK, GSK-3, GSK-3B, GSK-3beta, GSK-3betaSgg, GSK3, GSK3-beta, GSK3A, GSK3Beta, GSK3beta, GSK3beta/SGG, GSK3betagr, GSKbeta, Gsk-3, Gsk-3beta, Gsk3, Gsk3-beta, Gsk3beta, SGG, SGG/GSK3b, SHAGGY, Sgg, Sgg/Zw3/GSK3, Shaggy, ZW-3, ZW3, Zw-3, Zw3, Zw3-sh, Zw3/GSK3, Zw3[sgg], anon-WO03040301.254, gsk3, l(1)3Ba, l(1)G0055, l(1)G0183, l(1)G0263, l(1)G0335, l(1)zw3, sgg-1, sgg-zw3, sgg/GSK3, sgg/zw3, sgg10, sgg39, sgg46, zw-3, zw3, zw3(sgg), zw3/GSK3beta, zw3/sgg, zw3[sgg], zw[3]
Chromosome Location
Chr.X: 2633952 - 2679553 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID)
FBgn0003371
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001042794.4 NP_001036259.2 3 - 4 1292 134
NM_001169178.1 NP_001162649.1 4 - 5 917 134
NM_001169179.1 NP_001162650.1 3 - 4 539 134
NM_001272263.1 NP_001259192.1 4 - 5 2363 134
NM_001272264.1 NP_001259193.1 4 - 5 2494 134
NM_057366.5 NP_476714.1 3 - 4 924 134
NM_057367.5 NP_476715.1 3 - 4 563 134
NM_057368.5 NP_476716.2 2 - 3 2521 134
NM_134278.3 NP_599105.1 3 - 4 826 134
NM_166947.3 NP_726822.1 3 - 4 771 134
NM_166948.4 NP_726823.1 3 - 4 924 134
NM_206611.2 NP_996334.1 2 - 3 480 134
NM_206612.3 NP_996335.1 2 - 3 909 134
NM_206613.3 NP_996336.1 5 - 6 1213 134
NM_206614.3 NP_996337.1 4 - 5 807 134
NM_206615.2 NP_996338.1 3 - 4 737 134
GenBank mRNA AY122193.1 - 3 - 4 899 134
BT050474.1 - 2 - 3 859 134
BT072831.1 - 3 - 4 548 134
BT133153.1 - 2 - 3 2515 134
X70863.1 - - 883 134

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