Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: Pkn
Entrez Gene ID: 35950
Gene Name: Protein kinase N
Gene Aliases: 3-2, CG2049, CG2055, CG8, CT6637, CT6660, DPKN, Dmel\CG2049, Dmel_CG2049, Dpkn, PKC-related, PKN, PRK2, Pk45C, Pk?3, dPKN, l(2)06736, l(2)45Ca, pkn, v(2)rG232
Chromosome Location: Chr.2R: 9252310 - 9285097 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID): FBgn0020621

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001103767.2	NP_001097237.1	7 - 8	4400	64
	NM_001169624.1	NP_001163095.1	6 - 7	3749	64
	NM_001201966.2	NP_001188895.1	9 - 10	4344	64
	NM_001201967.1	NP_001188896.1	7 - 8	3959	64
	NM_001201968.3	NP_001188897.3	8 - 9	3864	64
	NM_001259291.2	NP_001246220.1	8 - 9	3805	64
	NM_001259292.2	NP_001246221.1	8 - 9	3936	64
	NM_001299312.1	NP_001286241.1	9 - 10	4456	64
	NM_001299313.1	NP_001286242.1	8 - 9	3526	64
	NM_001299314.1	NP_001286243.1	8 - 9	3865	64
	NM_001299315.1	NP_001286244.1	8 - 9	3859	64
	NM_176110.2	NP_788290.1	7 - 8	3595	64
	NM_176111.2	NP_788291.1	8 - 9	4246	64
	NM_176112.2	NP_788292.1	7 - 8	3717	64
	NM_176113.3	NP_788293.2	8 - 9	4368	64
	NM_176114.3	NP_788294.1	4 - 5	1465	64
GenBank mRNA	BT133091.1	-	8 - 9	4209	64
GenBank mRNA	BT133361.1	-	4 - 5	1474	64