Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
Irk1
Entrez Gene ID
42742
Gene Name
Inwardly rectifying potassium channel 1
Gene Aliases
CG13836, CG44159, CG6747, DIR, Dir, Dm_3R:100326, Dm_3R:100349, Dmel\CG44159, Dmel_CG44159, Ir, Kir1, dIRK, dKirI, ir, irk1
Chromosome Location
Chr.3R: 23168317 - 23185642 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID)
FBgn0265042
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001104414.2 NP_001097884.1 3 - 4 1395 63
NM_001170226.1 NP_001163697.1 3 - 4 875 63
NM_001202341.1 NP_001189270.1 3 - 4 1784 63
NM_001275932.1 NP_001262861.1 4 - 5 1770 63
NM_001275933.1 NP_001262862.1 4 - 5 1492 63
NM_001275934.1 NP_001262863.1 3 - 4 1298 63
NM_142874.3 NP_651131.2 2 - 3 864 63
GenBank mRNA AJ344344.1 - 2 - 3 864 63
BT132933.1 - 3 - 4 1386 63

Gene Symbol
CG46310
Entrez Gene ID
30522399
Gene Name
CG46310-PA
Gene Aliases
Dmel\CG46310, Dmel_CG46310, Ir-5'utr
Chromosome Location
Chr.3R: 23173873 - 23185642 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID)
FBgn0284226
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001347788.1 NP_001334697.1 3 - 4 1784 63

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