Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
CAST
Entrez Gene ID
831
Gene Name
calpastatin
Gene Aliases
BS-17, PLACK
Chromosome Location
Chr.5: 96662037 - 96774683 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001042440.3 NP_001035905.1 17 - 18 1572 143
NM_001190442.1 NP_001177371.1 18 - 19 1444 143
NM_001284212.2 NP_001271141.1 15 - 16 1223 143
NM_001284213.2 NP_001271142.1 14 - 15 1130 143
NM_173060.3 NP_775083.1 16 - 17 1280 143
NR_104285.1 4 - 5 436 143
XM_006714696.3 XP_006714759.1 20 - 21 1586 143
XM_006714697.3 XP_006714760.1 19 - 20 1603 143
XM_006714698.3 XP_006714761.1 18 - 19 1564 143
XM_006714699.3 XP_006714762.1 19 - 20 1527 143
XM_006714700.3 XP_006714763.1 18 - 19 1546 143
XM_006714701.3 XP_006714764.1 18 - 19 1562 143
XM_006714702.3 XP_006714765.1 18 - 19 1438 143
XM_006714703.3 XP_006714766.1 17 - 18 1523 143
XM_006714704.3 XP_006714767.1 18 - 19 1471 143
XM_006714705.3 XP_006714768.1 17 - 18 1480 143
XM_006714706.3 XP_006714769.1 17 - 18 1398 143
XM_006714707.3 XP_006714770.1 17 - 18 1349 143
XM_006714708.3 XP_006714771.1 16 - 17 1309 143
XM_006714709.3 XP_006714772.1 16 - 17 1272 143
XM_006714710.3 XP_006714773.1 15 - 16 1227 143
XM_006714711.3 XP_006714774.1 15 - 16 1272 143
XM_006714712.3 XP_006714775.1 14 - 15 1219 143
XM_006714713.3 XP_006714776.1 4 - 5 436 143
XM_006714714.3 XP_006714777.1 4 - 5 436 143
XM_006714715.3 XP_006714778.1 5 - 6 1162 143
XM_011543654.2 XP_011541956.1 18 - 19 1522 143
XM_011543655.2 XP_011541957.1 18 - 19 1519 143
XM_011543656.2 XP_011541958.1 17 - 18 1466 143
XM_011543657.2 XP_011541959.1 17 - 18 1348 143
XM_011543658.2 XP_011541960.1 15 - 16 1201 143
XM_017009911.1 XP_016865400.1 18 - 19 1564 143
XM_017009912.1 XP_016865401.1 19 - 20 1575 143
XM_017009913.1 XP_016865402.1 19 - 20 1544 143
XM_017009914.1 XP_016865403.1 18 - 19 1546 143
XM_017009915.1 XP_016865404.1 19 - 20 1548 143
XM_017009916.1 XP_016865405.1 18 - 19 1562 143
XM_017009917.1 XP_016865406.1 18 - 19 1480 143
XM_017009918.1 XP_016865407.1 17 - 18 1507 143
XM_017009919.1 XP_016865408.1 17 - 18 1480 143
XM_017009920.1 XP_016865409.1 17 - 18 1390 143
XM_017009921.1 XP_016865410.1 17 - 18 1407 143
XM_017009922.1 XP_016865411.1 16 - 17 1441 143
XM_017009923.1 XP_016865412.1 16 - 17 1441 143
XM_017009924.1 XP_016865413.1 16 - 17 1423 143
XM_017009925.1 XP_016865414.1 16 - 17 1359 143
XM_017009926.1 XP_016865415.1 16 - 17 1359 143
XM_017009927.1 XP_016865416.1 17 - 18 1348 143
XM_017009928.1 XP_016865417.1 16 - 17 1347 143
XM_017009929.1 XP_016865418.1 16 - 17 1266 143
XM_017009930.1 XP_016865419.1 15 - 16 1233 143
XM_017009931.1 XP_016865420.1 15 - 16 1227 143
XM_017009932.1 XP_016865421.1 14 - 15 1290 143
GenBank mRNA AB208816.1 - 18 - 19 1408 143
AF327443.1 - 13 - 14 1122 143
AK292289.1 - 4 - 5 436 143
AK292356.1 - 4 - 5 409 143
AK296919.1 - 18 - 19 1402 143
AK297879.1 - 16 - 17 1222 143
AK298541.1 - 17 - 18 1349 143
AK299402.1 - 17 - 18 1329 143
AK300624.1 - 14 - 15 1113 143
AK302206.1 - 5 - 6 436 143
AK311585.1 - 5 - 6 614 143
AK311598.1 - 5 - 6 490 143
AK314290.1 - 15 - 16 1225 143
AK315146.1 - 15 - 16 1224 143
AK315673.1 - 4 - 5 384 143
AL832349.1 - 16 - 17 1268 143
AY189741.1 - 6 - 7 435 143
BC013579.1 - 17 - 18 1275 143
BC078149.1 - 12 - 13 858 143
BT009783.1 - 14 - 15 1057 143
BX648397.1 - 15 - 16 1174 143
D16217.1 - 17 - 18 1342 143
DB033043.1 - 4 - 5 384 143
U31345.1 - 6 - 7 452 143
U58996.2 - 4 - 5 415 143

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