Product Details

Assay Reference Genome
Location

Chr.17:28398007 on build GRCh38
Cytoband
17q11.2
Species
Homo sapiens
Variation Type
Copy Number

Additional Information

Target Gene Details

Entrez Gene ID
23098
Gene Symbol
SARM1
Gene Name
sterile alpha and TIR motif containing 1
Gene Aliases
MyD88-5, SAMD2, SARM
Location
Chr.17:28371662-28401045 on build GRCh38
Assay Gene Location
Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Location Protein ID
SARM1 NM_015077.3 9 4267 NP_055892.2
AB011096.1 9 3519 BAA25450.1
AJ290445.1 9 3822 CAB90355.1
AK026397.1 2 1771
AK093615.1 6 2763
AK302038.1
BC040429.1 9 3855
Entrez Gene ID
113235
Gene Symbol
SLC46A1
Gene Name
solute carrier family 46 member 1
Gene Aliases
G21, HCP1, PCFT
Location
Chr.17:28394642-28406630 on build GRCh38
Assay Gene Location
Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Location Protein ID
SLC46A1 NM_001242366.2 4 3043 NP_001229295.1
NM_080669.5 5 3127 NP_542400.2
XM_005277786.3 3 2886 XP_005277843.1
XM_017024110.1 6 3086 XP_016879599.1
AK074161.1 3 2141 BAB84987.1
AL832613.2 4 2435 CAD89945.1
DA013269.1 1 389

Target Copy Number Variation Details

DGV Version
Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1062056 Chr17:28376191 - 28452023 on Build GRCh38 Gain SLC46A1 SARM1
nsv1056839 Chr17:28348199 - 28428188 on Build GRCh38 Gain MIR4723 TMEM199 SLC46A1 SEBOX SARM1 VTN POLDIP2
nsv574653 Chr17:28227749 - 28501479 on Build GRCh38 Gain PPY2P TMEM199 RPS7P1 LOC105371712 SLC13A2 SLC46A1 LOC105371930 SEBOX SARM1 POLDIP2 LOC101926984 MIR4723 IFT20 TMEM97 TNFAIP1 PYY2 VTN KRT18P55

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