Assay Design
The assay primers and probes lie within a single exon. This assay will detect gDNA.
Gene Transcripts
- Gene Symbol
- SCN8A
- Entrez Gene ID
-
6334
- Gene Name
- sodium voltage-gated channel alpha subunit 8
- Gene Aliases
-
CERIII, CIAT, EIEE13, MED, NaCh6, Nav1.6, PN4
- Chromosome Location
-
Chr.12: 51589959 - 51812865 on Build GRCh38
Non Gene Transcripts
Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
IMAGE Clone ID |
Transcript Location |
Amplicon Length |
GenBankmRNA |
DB367684.1 |
- |
1 |
|
|
Chr. 12 - 51809706 - 51810254 [-] on Build GRCh38 |
88 |
GenBankmRNA |
AL117588.1 |
- |
1 |
|
|
Chr. 12 - 51809705 - 51810600 [-] on Build GRCh38 |
88 |
GenBankmRNA |
BX954114.1 |
- |
1 |
646 |
|
Chr. 12 - 51809375 - 51810142 [+] on Build GRCh38 |
88 |
GenBankmRNA |
AA479288.1 |
- |
1 |
146 |
|
Chr. 12 - 51809876 - 51810380 [+] on Build GRCh38 |
88 |
GenBankmRNA |
AA479385.1 |
- |
1 |
|
|
Chr. 12 - 51809876 - 51810396 [-] on Build GRCh38 |
88 |
Adjacent Gene Details
|
Gene Name |
Gene Symbol |
Alias |
Distance |
Relative Direction |
Location Chromosome |
Upstream |
solute carrier family 4 member 8 |
SLC4A8 |
NBC3, NDCBE |
-290.5kb
|
Sense |
Chr. - 51391317 - 51515763 on Build GRCh38 |
Downstream |
fidgetin like 2 |
FIGNL2 |
|
5.0kb
|
Anti-sense |
Chr. - 51817892 - 51848753 on Build GRCh38 |
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