Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
CAST
Entrez Gene ID
831
Gene Name
calpastatin
Gene Aliases
BS-17, PLACK
Chromosome Location
Chr.5: 96662037 - 96774683 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001042440.3 NP_001035905.1 23 - 24 2075 93
NM_001190442.1 NP_001177371.1 24 - 25 1947 93
NM_001284213.2 NP_001271142.1 20 - 21 1633 93
NM_173060.3 NP_775083.1 22 - 23 1783 93
XM_006714696.3 XP_006714759.1 26 - 27 2089 93
XM_006714698.3 XP_006714761.1 24 - 25 2067 93
XM_006714699.3 XP_006714762.1 25 - 26 2030 93
XM_006714700.3 XP_006714763.1 24 - 25 2049 93
XM_006714701.3 XP_006714764.1 24 - 25 2065 93
XM_006714702.3 XP_006714765.1 24 - 25 1941 93
XM_006714703.3 XP_006714766.1 23 - 24 2026 93
XM_006714704.3 XP_006714767.1 24 - 25 1974 93
XM_006714706.3 XP_006714769.1 23 - 24 1901 93
XM_006714707.3 XP_006714770.1 23 - 24 1852 93
XM_006714708.3 XP_006714771.1 22 - 23 1812 93
XM_006714709.3 XP_006714772.1 22 - 23 1775 93
XM_006714710.3 XP_006714773.1 21 - 22 1730 93
XM_006714711.3 XP_006714774.1 21 - 22 1775 93
XM_006714712.3 XP_006714775.1 20 - 21 1722 93
XM_006714713.3 XP_006714776.1 10 - 11 939 93
XM_006714715.3 XP_006714778.1 11 - 12 1665 93
XM_011543654.2 XP_011541956.1 24 - 25 2025 93
XM_011543655.2 XP_011541957.1 24 - 25 2022 93
XM_011543656.2 XP_011541958.1 23 - 24 1969 93
XM_011543657.2 XP_011541959.1 23 - 24 1851 93
XM_011543658.2 XP_011541960.1 21 - 22 1704 93
XM_017009913.1 XP_016865402.1 25 - 26 2047 93
XM_017009915.1 XP_016865404.1 25 - 26 2051 93
XM_017009917.1 XP_016865406.1 24 - 25 1983 93
XM_017009918.1 XP_016865407.1 23 - 24 2010 93
XM_017009919.1 XP_016865408.1 23 - 24 1983 93
XM_017009920.1 XP_016865409.1 23 - 24 1893 93
XM_017009922.1 XP_016865411.1 22 - 23 1944 93
XM_017009925.1 XP_016865414.1 22 - 23 1862 93
XM_017009930.1 XP_016865419.1 21 - 22 1736 93
GenBank mRNA AB208816.1 - 24 - 25 1911 93
AF327443.1 - 19 - 20 1625 93
AK292289.1 - 10 - 11 939 93
AK292356.1 - 10 - 11 912 93
AK296919.1 - 24 - 25 1905 93
AK297879.1 - 22 - 23 1725 93
AK298541.1 - 23 - 24 1852 93
AK299384.1 - 21 - 22 1483 93
AK299402.1 - 23 - 24 1832 93
AK300624.1 - 20 - 21 1616 93
AK314290.1 - 21 - 22 1728 93
AK315146.1 - 21 - 22 1727 93
AL832174.1 - 22 - 23 1768 93
AL832349.1 - 22 - 23 1771 93
AY189741.1 - 12 - 13 938 93
BC013579.1 - 23 - 24 1778 93
BC078149.1 - 18 - 19 1337 93
BT009783.1 - 20 - 21 1560 93
D16217.1 - 23 - 24 1845 93
D50827.1 - 1 - 2 93 93
S73329.1 - 2 - 3 117 93
U26724.2 - 14 - 15 1208 93
U31346.1 - 2 - 3 168 93
U38525.1 - 5 - 6 411 93

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