Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: MAP6
Entrez Gene ID: 4135
Gene Name: microtubule associated protein 6
Gene Aliases: MAP6-N, MTAP6, N-STOP, STOP
Chromosome Location: Chr.11: 75586914 - 75671108 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	XM_006718556.3	XP_006718619.1	1 - 1	2621	96
	XM_011545039.2	XP_011543341.1	1 - 1	2622	96
	XM_017017755.1	XP_016873244.1	1 - 1	2521	96

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	CR740965.1	-	1			Chr. 11 - 75668372 - 75668713 [+] on Build GRCh38	96
GenBankmRNA	DR763219.1	-	1	39		Chr. 11 - 75667738 - 75668491 [-] on Build GRCh38	96
GenBankmRNA	BF363002.1	-	1			Chr. 11 - 75668270 - 75668495 [+] on Build GRCh38	96
GenBankmRNA	DR003017.1	-	1	222		Chr. 11 - 75668094 - 75668665 [-] on Build GRCh38	96
GenBankmRNA	DA743021.1	-	1			Chr. 11 - 75668216 - 75668730 [+] on Build GRCh38	96
GenBankmRNA	CR609646.1	-	1			Chr. 11 - 75667664 - 75669120 [+] on Build GRCh38	96
GenBankmRNA	BX339321.2	-	1			Chr. 11 - 75667696 - 75668656 [+] on Build GRCh38	96
GenBankmRNA	HY121308.1	-	1	148		Chr. 11 - 75668268 - 75668597 [-] on Build GRCh38	96
GenBankmRNA	DA339628.1	-	1	120		Chr. 11 - 75608080 - 75668572 [-] on Build GRCh38	96

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	serpin family H member 1	SERPINH1	AsTP3, CBP1, CBP2, HSP47, OI10, PIG14, PPROM, RA-A47, SERPINH2, gp46	-94.9kb	Anti-sense	Chr. - 75562056 - 75572804 on Build GRCh38
Downstream	monoacylglycerol O-acyltransferase 2	MOGAT2	DGAT2L5, DGAT2L5., MGAT2, hDC5	49.3kb	Anti-sense	Chr. - 75717819 - 75732958 on Build GRCh38

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