Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
ZBTB20
Entrez Gene ID
26137
Gene Name
zinc finger and BTB domain containing 20
Gene Aliases
DPZF, HOF, ODA-8S, PRIMS, ZNF288
Chromosome Location
Chr.3: 114314500 - 115147280 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001164342.2 NP_001157814.1 5 - 5 5854 111
NM_001164343.2 NP_001157815.1 12 - 12 6316 111
NM_001164344.2 NP_001157816.1 8 - 8 6280 111
NM_001164345.2 NP_001157817.1 7 - 7 6234 111
NM_001164346.2 NP_001157818.1 6 - 6 5873 111
NM_001164347.2 NP_001157819.1 6 - 6 5895 111
NM_015642.5 NP_056457.3 10 - 10 6078 111
NR_121662.1 7 - 7 4336 111
GenBank mRNA AK022228.1 - 1 - 1 1695 111


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BG025240.1 - 1 244 Chr. 3 - 114334968 - 114335800 [-] on Build GRCh38 112
GenBankmRNA BG402430.1 - 83 Chr. - - [-] on Build 112
GenBankmRNA BX487283.1 - 1 273 Chr. 3 - 114335337 - 114335829 [-] on Build GRCh38 111
GenBankmRNA DN991835.1 - 1 508 Chr. 3 - 114335476 - 114336057 [-] on Build GRCh38 111
GenBankmRNA AA056060.1 - 1 207 Chr. 3 - 114335158 - 114335763 [-] on Build GRCh38 111


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream microRNA 568 MIR568 MIRN568, hsa-mir-568 Sense Chr. - 114316475 - 114316569 on Build GRCh38
Downstream ZBTB20 antisense RNA 1 ZBTB20-AS1 12.4kb Anti-sense Chr. - 114351811 - 114388978 on Build GRCh38

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