Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
FTX
Entrez Gene ID
100302692
Gene Name
FTX transcript, XIST regulator (non-protein coding)
Gene Aliases
LINC00182, MIR374AHG, NCRNA00182
Chromosome Location
Chr.X: 74028136 - 74293574 on Build GRCh38
Interrogated Sequence Translated Protein RNADB ID Exon Boundary Assay Location Amplicon Length
RefSeq NR_028379.1
2 - 3 367 109
GenBank mRNA AK057701.1 - LIT1007
Ftx		 2 - 3 318 109
AK311345.1 -
2 - 3 367 109


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA HY075574.1 - 2 - 3 260 Chr. X - 74280447 - 74292284 [-] on Build GRCh38 109
GenBankmRNA DA182706.1 - 2 - 3 423 Chr. X - 74280930 - 74292036 [-] on Build GRCh38 109
GenBankmRNA DC389436.1 - 2 - 3 317 Chr. X - 74280380 - 74293524 [-] on Build GRCh38 109
GenBankmRNA DA857504.1 - 2 - 3 329 Chr. X - 74280405 - 74292353 [-] on Build GRCh38 109
GenBankmRNA HY132649.1 - 2 - 3 332 Chr. X - 74280930 - 74292355 [-] on Build GRCh38 109
GenBankmRNA HY129851.1 - 2 - 3 366 Chr. X - 74280967 - 74293573 [-] on Build GRCh38 109
GenBankmRNA CB990632.1 - 354 Chr. - - [-] on Build 109
GenBankmRNA CN412172.1 - 2 - 3 265 Chr. X - 74069358 - 74293472 [-] on Build GRCh38 109
GenBankmRNA DA685273.1 - 2 - 3 303 Chr. X - 74280411 - 74292585 [-] on Build GRCh38 109
GenBankmRNA DA246751.1 - 2 - 3 346 Chr. X - 74280411 - 74292628 [-] on Build GRCh38 109
GenBankmRNA DC353348.1 - 2 - 3 323 Chr. X - 74280461 - 74293530 [-] on Build GRCh38 109
GenBankmRNA DC390943.1 - 2 - 3 336 Chr. X - 74280427 - 74293543 [-] on Build GRCh38 109
GenBankmRNA DA755860.1 - 2 - 3 331 Chr. X - 74280408 - 74292355 [-] on Build GRCh38 109
GenBankmRNA DB113703.1 - 2 - 3 320 Chr. X - 74280400 - 74292343 [-] on Build GRCh38 109
GenBankmRNA AA775951.1 - 2 - 3 220 Chr. X - 74280474 - 74293427 [-] on Build GRCh38 109
GenBankmRNA HY101032.1 - 2 - 3 276 Chr. X - 74280456 - 74292556 [-] on Build GRCh38 109
GenBankmRNA DB100925.1 - 2 - 3 247 Chr. X - 74280126 - 74292529 [-] on Build GRCh38 109
GenBankmRNA BG718066.1 - 2 - 3 326 Chr. X - 74247864 - 74293527 [-] on Build GRCh38 109
GenBankmRNA DA932670.1 - 2 - 3 339 Chr. X - 74280432 - 74292362 [-] on Build GRCh38 109
GenBankmRNA DC410386.1 - 2 - 3 332 Chr. X - 74280431 - 74293539 [-] on Build GRCh38 109
GenBankmRNA DB015792.1 - 2 - 3 314 Chr. X - 74280396 - 74292596 [-] on Build GRCh38 109
GenBankmRNA DC408596.1 - 2 - 3 344 Chr. X - 74280944 - 74293550 [-] on Build GRCh38 109
GenBankmRNA BM546361.1 - 2 - 3 176 Chr. X - 73964008 - 74292342 [-] on Build GRCh38 109
GenBankmRNA DB195000.1 - 2 - 3 261 Chr. X - 74280390 - 74292542 [-] on Build GRCh38 109
GenBankmRNA DA530693.1 - 2 - 3 301 Chr. X - 74280345 - 74292583 [-] on Build GRCh38 109
GenBankmRNA AW629991.1 - 2 - 3 176 Chr. X - 74280461 - 74291789 [-] on Build GRCh38 109
GenBankmRNA HY075234.1 - 2 - 3 260 Chr. X - 74280433 - 74292284 [-] on Build GRCh38 109
GenBankmRNA DB136402.1 - 2 - 3 340 Chr. X - 74280444 - 74292363 [-] on Build GRCh38 109
GenBankmRNA HY029598.1 - 2 - 3 357 Chr. X - 74280983 - 74292376 [-] on Build GRCh38 109
GenBankmRNA DA990651.1 - 2 - 3 Chr. X - 74280449 - 74292633 [-] on Build GRCh38 109
GenBankmRNA DC338971.1 - 2 - 3 331 Chr. X - 74280407 - 74293536 [-] on Build GRCh38 109
GenBankmRNA DC366395.1 - 2 - 3 323 Chr. X - 74280934 - 74293530 [-] on Build GRCh38 109
GenBankmRNA DC366327.1 - 2 - 3 323 Chr. X - 74280401 - 74293530 [-] on Build GRCh38 109
GenBankmRNA DC390874.1 - 2 - 3 337 Chr. X - 74280445 - 74293539 [-] on Build GRCh38 109
GenBankmRNA DB200442.1 - 2 - 3 327 Chr. X - 74280402 - 74292351 [-] on Build GRCh38 109
GenBankmRNA DC353548.1 - 2 - 3 367 Chr. X - 74280930 - 74293574 [-] on Build GRCh38 109
GenBankmRNA DC414119.1 - 2 - 3 323 Chr. X - 74274374 - 74293530 [-] on Build GRCh38 109
GenBankmRNA HY158243.1 - 2 - 3 317 Chr. X - 74280930 - 74293524 [-] on Build GRCh38 109
GenBankmRNA DC304376.1 - 2 - 3 303 Chr. X - 74280385 - 74293509 [-] on Build GRCh38 109
GenBankmRNA DA397381.1 - 2 - 3 312 Chr. X - 74280393 - 74292594 [-] on Build GRCh38 109
GenBankmRNA DA032603.1 - 2 - 3 247 Chr. X - 74274356 - 74292529 [-] on Build GRCh38 109
GenBankmRNA HY132287.1 - 2 - 3 324 Chr. X - 74280930 - 74293530 [-] on Build GRCh38 109
GenBankmRNA BI834634.1 - 2 - 3 301 Chr. X - 74280420 - 74292325 [-] on Build GRCh38 109
GenBankmRNA AV754330.1 - 2 - 3 225 Chr. X - 74280301 - 74292508 [-] on Build GRCh38 109
GenBankmRNA DB247233.1 - 2 - 3 318 Chr. X - 74280215 - 74292600 [-] on Build GRCh38 109


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream microRNA 374c MIR374C mir-374c -62.3kb Anti-sense Chr. - 74218549 - 74218618 on Build GRCh38
Downstream microRNA 545 MIR545 MIRN545, hsa-mir-545, mir-545 5.3kb Sense Chr. - 74287104 - 74287209 on Build GRCh38

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